dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00828
Location and strand information: 285853 - 286908 (+)
Family: 3.A.1.5.38
Protein type: TC
Protein description: Dipeptide transport system permease protein DppB

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00829
Location and strand information: 286905 - 287774 (+)
Family: 3.A.1.5.38
Protein type: TC
Protein description: putative D,D-dipeptide transport system permease protein DdpC

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00830
Location and strand information: 287764 - 288606 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Dipeptide transport ATP-binding protein DppD

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00831
Location and strand information: 288603 - 289274 (+)
Family: 3.A.1.5.39
Protein type: TC
Protein description: putative D,D-dipeptide transport ATP-binding protein DdpF

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00832
Location and strand information: 289407 - 290990 (+)
Family: 3.A.1.5.39
Protein type: TC
Protein description: putative D,D-dipeptide-binding periplasmic protein DdpA

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00833
Location and strand information: 291053 - 292321 (-)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00834
Location and strand information: 292419 - 293201 (-)
Family: 3.A.15.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00835
Location and strand information: 293634 - 295145 (+)
Family: 1.B.54.1.9
Protein type: TC
Protein description: Intimin

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00836
Location and strand information: 295142 - 295792 (-)
Family: GerE
Protein type: TF
Protein description: Nitrate/nitrite response regulator protein NarL

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00837
Location and strand information: 295803 - 297587 (-)
Family: HATPase_c
Protein type: STP
Protein description: Nitrate/nitrite sensor protein NarX

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00838
Location and strand information: 297939 - 299333 (+)
Family: 2.A.1.8.1
Protein type: TC
Protein description: Nitrate/nitrite transporter NarK

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00839
Location and strand information: 300105 - 301004 (+)
Family: Trans_reg_C
Protein type: TF
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00840
Location and strand information: 301183 - 302145 (+)
Family: null
Protein type: null
Protein description: N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00841
Location and strand information: 302319 - 303368 (+)
Family: 9.B.146.1.7
Protein type: TC
Protein description: Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00842
Location and strand information: 303438 - 304547 (+)
Family: 1.B.18.3.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00843
Location and strand information: 304575 - 306746 (+)
Family: 8.A.3.3.2
Protein type: TC
Protein description: Tyrosine-protein kinase wzc

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00844
Location and strand information: 306751 - 308040 (+)
Family: 2.A.66.12.4
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00845
Location and strand information: 308030 - 308878 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00846
Location and strand information: 309013 - 309918 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.4563
Protein molecular weight: 34429.14
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00847
Location and strand information: 309920 - 310975 (+)
Family: GT4
Protein type: CAZyme
Protein description: GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase
Protein isoelectric point: 9.7909
Protein molecular weight: 39831.47
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00848
Location and strand information: 310986 - 311729 (+)
Family: GT2
Protein type: CAZyme
Protein description: Putative teichuronic acid biosynthesis glycosyltransferase TuaG
Protein isoelectric point: 9.2101
Protein molecular weight: 28805.78
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00849
Location and strand information: 311726 - 313609 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00850
Location and strand information: 313622 - 314608 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 8.5701
Protein molecular weight: 37000.44
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00851
Location and strand information: 314654 - 315556 (+)
Family: GT2
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 10.0383
Protein molecular weight: 33976.27
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00852
Location and strand information: 315836 - 319597 (+)
Family: 5.A.3.1.1
Protein type: TC
Protein description: Respiratory nitrate reductase 1 alpha chain

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00853
Location and strand information: 319594 - 321138 (+)
Family: 5.A.3.1.1
Protein type: TC
Protein description: Respiratory nitrate reductase 1 beta chain

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00854
Location and strand information: 321135 - 321857 (+)
Family: null
Protein type: null
Protein description: Nitrate reductase molybdenum cofactor assembly chaperone NarJ

Gene clsuter ID: MGYG000003399_3|CGC4
Gene ID: MGYG000003399_00855
Location and strand information: 321860 - 322537 (+)
Family: 5.A.3.1.1
Protein type: TC
Protein description: Respiratory nitrate reductase 1 gamma chain

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is capsule polysaccharide synthesis download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000003399_00828	Dipeptide transport system permease protein DppB	TC	285853	286908	+	3.A.1.5.38
MGYG000003399_00829	putative D,D-dipeptide transport system permease protein DdpC	TC	286905	287774	+	3.A.1.5.38
MGYG000003399_00830	Dipeptide transport ATP-binding protein DppD	TC	287764	288606	+	3.A.1.5.2
MGYG000003399_00831	putative D,D-dipeptide transport ATP-binding protein DdpF	TC	288603	289274	+	3.A.1.5.39
MGYG000003399_00832	putative D,D-dipeptide-binding periplasmic protein DdpA	TC	289407	290990	+	3.A.1.5.39
MGYG000003399_00833	hypothetical protein	null	291053	292321	-	EpsG
MGYG000003399_00834	hypothetical protein	TC	292419	293201	-	3.A.15.2.1
MGYG000003399_00835	Intimin	TC	293634	295145	+	1.B.54.1.9
MGYG000003399_00836	Nitrate/nitrite response regulator protein NarL	TF	295142	295792	-	GerE
MGYG000003399_00837	Nitrate/nitrite sensor protein NarX	STP	295803	297587	-	HATPase_c
MGYG000003399_00838	Nitrate/nitrite transporter NarK	TC	297939	299333	+	2.A.1.8.1
MGYG000003399_00839	hypothetical protein	TF	300105	301004	+	Trans_reg_C
MGYG000003399_00840	N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans,octacis-undecaprenol 4-epimerase	null	301183	302145	+	Epimerase
MGYG000003399_00841	Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase	TC	302319	303368	+	9.B.146.1.7
MGYG000003399_00842	hypothetical protein	TC	303438	304547	+	1.B.18.3.1
MGYG000003399_00843	Tyrosine-protein kinase wzc	TC	304575	306746	+	8.A.3.3.2
MGYG000003399_00844	hypothetical protein	TC	306751	308040	+	2.A.66.12.4
MGYG000003399_00845	hypothetical protein	null	308030	308878	+	ATPgrasp_TupA
MGYG000003399_00846	hypothetical protein	CAZyme	309013	309918	+	GT2
MGYG000003399_00847	GalNAc-alpha-(1->4)-GalNAc-alpha-(1->3)-diNAcBac-PP-undecaprenol alpha-1,4-N-acetyl-D-galactosaminyltransferase	CAZyme	309920	310975	+	GT4
MGYG000003399_00848	Putative teichuronic acid biosynthesis glycosyltransferase TuaG	CAZyme	310986	311729	+	GT2
MGYG000003399_00849	hypothetical protein	null	311726	313609	+	No domain
MGYG000003399_00850	hypothetical protein	CAZyme	313622	314608	+	GT2
MGYG000003399_00851	hypothetical protein	CAZyme	314654	315556	+	GT2
MGYG000003399_00852	Respiratory nitrate reductase 1 alpha chain	TC	315836	319597	+	5.A.3.1.1
MGYG000003399_00853	Respiratory nitrate reductase 1 beta chain	TC	319594	321138	+	5.A.3.1.1
MGYG000003399_00854	Nitrate reductase molybdenum cofactor assembly chaperone NarJ	null	321135	321857	+	Nitrate_red_del
MGYG000003399_00855	Respiratory nitrate reductase 1 gamma chain	TC	321860	322537	+	5.A.3.1.1
Protein ID	Protein Name	Type	Start	End	Strand	Signature